{ "_id": "6a103610acfb0bcc41c99f03", "Package": "ruminate", "Title": "A Pharmacometrics Data Transformation and Analysis Tool", "Version": "0.4.0", "Authors@R": "person(\"John\", \"Harrold\", , \"john.m.harrold@gmail.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-2052-4373\"))", "Description": "Exploration of pharmacometrics data involves both general\ntools (transformation and plotting) and specific techniques\n(non-compartmental analysis). This kind of exploration is\ngenerally accomplished by utilizing different packages. The\npurpose of 'ruminate' is to create a 'shiny' interface to make\nthese tools more broadly available while creating reproducible\nresults. Currently there are modules for uploading one or more\ndatasets, data wrangling, plot genreation, non-compartmental\nanalysis, construction of ODE-based models, and constructing\nand running adaptive trial simualtions. Analyses can be saved\nand reloaded later. It's possible to create workflows to\nautomate analyses. There is integrated reporting in Word,\nPowerpoint and Excel. You can also generate scripts to\nreplicate what was done in the app to create a stand-alone\nscript to run in validated environments.", "License": "BSD_2_clause + file LICENSE", "BugReports": "https://github.com/john-harrold/ruminate/issues", "URL": "https://ruminate.ubiquity.tools/", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libfribidi-dev make libharfbuzz-dev libicu-dev\nlibjpeg-dev libpng-dev libtiff-dev libuv1-dev libwebp-dev\nlibxml2-dev libssl-dev libx11-dev zlib1g-dev", "Repository": "https://john-harrold.r-universe.dev", "Date/Publication": "2026-02-11 04:55:23 UTC", "RemoteUrl": "https://github.com/john-harrold/ruminate", "RemoteRef": "HEAD", "RemoteSha": "2b58cceec27d0ed72f243dc2f27bb45f1aa737b2", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-12 07:00:16 UTC", "User": "root" }, "Author": "John Harrold [aut, cre] (ORCID:\n)", "Maintainer": "John Harrold ", "MD5sum": "8ed19dda7376c63cf123032fab608638", "_user": "john-harrold", "_type": "src", "_file": "ruminate_0.4.0.tar.gz", "_fileid": "bade1d96befbf610fd9fae412a5e6adbe64865ee8515f5669cce007092b46d0a", "_filesize": 1746727, "_sha256": "bade1d96befbf610fd9fae412a5e6adbe64865ee8515f5669cce007092b46d0a", "_created": "2026-05-12T07:00:16.000Z", "_published": "2026-05-22T10:55:12.612Z", "_distro": "noble", "_jobs": [ { "job": 77365428958, "time": 417, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6937798632" }, { "job": 77365429215, "time": 480, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6937817974" }, { "job": 77365429194, "time": 303, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "6937763272" }, { "job": 77365429088, "time": 319, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6937767352" }, { "job": 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"nca_append_report_tbls" ] }, { "page": "nca_builder", "title": "Builds NCA Code from ui Elements", "topics": [ "nca_builder" ] }, { "page": "NCA_fetch_ana_ds", "title": "Fetch Analysis Dataset", "topics": [ "NCA_fetch_ana_ds" ] }, { "page": "NCA_fetch_ana_pknca", "title": "Fetch PKNCA Results Object", "topics": [ "NCA_fetch_ana_pknca" ] }, { "page": "NCA_fetch_code", "title": "Fetch Module Code", "topics": [ "NCA_fetch_code" ] }, { "page": "NCA_fetch_current_ana", "title": "Fetches Current Analysis", "topics": [ "NCA_fetch_current_ana" ] }, { "page": "NCA_fetch_current_obj", "title": "Fetches the Current Analysis Object", "topics": [ "NCA_fetch_current_obj" ] }, { "page": "NCA_fetch_data_format", "title": "Fetches Details About Data Requirements", "topics": [ "NCA_fetch_data_format" ] }, { "page": "NCA_fetch_ds", "title": "Fetch Module Datasets", "topics": [ "NCA_fetch_ds" ] }, { "page": "NCA_fetch_np_meta", "title": "Fetches NCA Parameter Meta Information", "topics": [ 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